STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ62976.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (397 aa)    
Predicted Functional Partners:
ORJ62975.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.886
ORJ63128.1
Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.853
ORJ62973.1
Outer membrane lipoprotein-sorting protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
ORJ62974.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.842
ORJ62889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
ORJ55917.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.649
ORJ59802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.604
ORJ59571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.594
ORJ60442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
ORJ57406.1
Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.449
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.