STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ62220.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
ORJ62184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.895
ORJ57581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.819
ORJ57448.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.806
ORJ59565.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.794
ORJ62999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.790
ORJ59546.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.730
ORJ55853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.697
ORJ59835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.672
ORJ59604.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.672
ORJ53224.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.643
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.