STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ61306.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)    
Predicted Functional Partners:
ORJ61310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.957
ORJ61308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
ORJ57497.1
Conjugal transfer protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.874
ORJ61307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.863
ORJ60253.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.859
ORJ53260.1
HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.859
ORJ52665.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.859
ORJ62410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.818
ORJ57495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.812
ORJ57510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.