Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ORJ54761.1 | ORJ63568.1 | B5V00_15690 | B5V00_01490 | Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. | Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
| ORJ54761.1 | deoB | B5V00_15690 | B5V00_08135 | Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.891 |
| ORJ54761.1 | deoC | B5V00_15690 | B5V00_08130 | Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.922 |
| ORJ54761.1 | prs | B5V00_15690 | B5V00_02980 | Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. | Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.947 |
| ORJ59589.1 | ORJ60601.1 | B5V00_09915 | B5V00_07120 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| ORJ59589.1 | deoB | B5V00_09915 | B5V00_08135 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.973 |
| ORJ59589.1 | deoC | B5V00_09915 | B5V00_08130 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.524 |
| ORJ60519.1 | argJ | B5V00_08120 | B5V00_08125 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.794 |
| ORJ60519.1 | deoB | B5V00_08120 | B5V00_08135 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.788 |
| ORJ60519.1 | deoC | B5V00_08120 | B5V00_08130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.780 |
| ORJ60519.1 | secA | B5V00_08120 | B5V00_08115 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.764 |
| ORJ60601.1 | ORJ59589.1 | B5V00_07120 | B5V00_09915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.627 |
| ORJ60601.1 | deoB | B5V00_07120 | B5V00_08135 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.728 |
| ORJ60601.1 | deoC | B5V00_07120 | B5V00_08130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.494 |
| ORJ60601.1 | mtnP | B5V00_07120 | B5V00_09940 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.627 |
| ORJ63568.1 | ORJ54761.1 | B5V00_01490 | B5V00_15690 | Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family. | 0.927 |
| ORJ63568.1 | deoB | B5V00_01490 | B5V00_08135 | Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.883 |
| ORJ63568.1 | deoC | B5V00_01490 | B5V00_08130 | Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.870 |
| ORJ63568.1 | prs | B5V00_01490 | B5V00_02980 | Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.918 |
| argJ | ORJ60519.1 | B5V00_08125 | B5V00_08120 | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
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