STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ60339.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
ORJ60340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.789
ORJ62915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
 0.673
ORJ60338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.618
ORJ63371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.575
ORJ57600.1
Cytochrome C552; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.575
ORJ62374.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.565
ORJ62417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.565
ORJ62435.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.565
ORJ62437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.565
ORJ60664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.565
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.