STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ59330.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)    
Predicted Functional Partners:
ORJ59331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.878
ORJ59565.1
Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.866
ORJ55853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.858
ORJ57581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.830
ORJ57448.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.815
ORJ62999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.801
ORJ59332.1
Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
ORJ58697.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.758
ORJ59546.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.752
ORJ57157.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.707
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.