STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ59073.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.811
ORJ59072.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORJ57668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
  0.711
ORJ62366.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.637
ORJ62143.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.637
ORJ57695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.592
ORJ59074.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.538
rlpA
Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
       0.536
ORJ62019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.523
ORJ54965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.523
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.