STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORJ53251.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
ORJ53250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.800
ORJ53252.1
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
ORJ61315.1
Phage recombination protein Bet; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
ORJ57653.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.557
ORJ55821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
ORJ62972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.533
ORJ63047.1
YbbR domain pair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
ORJ59890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
ORJ53676.1
Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
ORJ63327.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
Your Current Organism:
Geothermobacter sp. EPRM
NCBI taxonomy Id: 1969733
Other names: G. sp. EPR-M, Geothermobacter sp. EPR-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.