STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B6241_07125Transcription elongation factor GreA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
OQY35274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.917
OQY31365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.871
OQY35641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.816
OQY35300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.803
OQY33668.1
Glucosyl-3-phosphoglycerate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.785
OQY34857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.763
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.760
OQY35278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.741
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.732
OQY34708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.697
Your Current Organism:
Spirochaetaceae bacterium 457259
NCBI taxonomy Id: 1971727
Other names: S. bacterium 4572_59, Spirochaetaceae bacterium 4572_59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.