STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY33454.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (140 aa)    
Predicted Functional Partners:
OQY33455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.693
OQY35301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
OQY33456.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
OQY33453.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.607
OQY34912.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.591
B6241_11140
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
OQY32377.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.531
OQY31482.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.521
OQY33166.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
OQY32696.1
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.408
Your Current Organism:
Spirochaetaceae bacterium 457259
NCBI taxonomy Id: 1971727
Other names: S. bacterium 4572_59, Spirochaetaceae bacterium 4572_59
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