STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citGHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
OQY32971.1
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
 0.999
OQY32976.1
Citrate lyase holo-[acyl-carrier protein] synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OQY32973.1
Citrate (pro-3S)-lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.998
OQY32974.1
Citrate lyase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.997
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
   
    0.765
OQY32977.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
OQY32978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
OQY32979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
OQY32980.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
Your Current Organism:
Spirochaetaceae bacterium 457259
NCBI taxonomy Id: 1971727
Other names: S. bacterium 4572_59, Spirochaetaceae bacterium 4572_59
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