STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQY32264.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)    
Predicted Functional Partners:
OQY32839.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.945
OQY31482.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.941
OQY35486.1
Putative selenate reductase subunit YgfK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.835
OQY31065.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.764
OQY32194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
OQY35335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.752
OQY34414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.743
OQY34415.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.743
OQY32405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
OQY32263.1
Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.738
Your Current Organism:
Spirochaetaceae bacterium 457259
NCBI taxonomy Id: 1971727
Other names: S. bacterium 4572_59, Spirochaetaceae bacterium 4572_59
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