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rpl9 protein (Thermosynechococcus elongatus) - STRING interaction network
"rpl9" - 50S ribosomal protein L9 in Thermosynechococcus elongatus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl950S ribosomal protein L9; Binds to the 23S rRNA (152 aa)    
Predicted Functional Partners:
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (71 aa)
   
 
  0.996
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (212 aa)
   
 
  0.994
rplQ
annotation not available (116 aa)
   
 
  0.994
rpmA
annotation not available (86 aa)
     
 
  0.994
rps9
annotation not available (137 aa)
     
 
  0.994
rpmB
annotation not available (104 aa)
     
 
  0.993
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (120 aa)
   
 
  0.992
rps6
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (114 aa)
 
 
  0.991
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (152 aa)
   
 
  0.989
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (104 aa)
   
 
  0.989
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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