STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr0189ORF_ID:tlr0189; hypothetical protein. (246 aa)    
Predicted Functional Partners:
folC
Folylpolyglutamate synthase; ORF_ID:tlr0190; Belongs to the folylpolyglutamate synthase family.
       0.762
tlr0828
ORF_ID:tlr0828; unknown protein.
   
 0.651
tll0187
ORF_ID:tll0187; probable sugar transport inner membrane protein.
       0.522
tll0188
Ammonium/methylammonium permease; ORF_ID:tll0188.
       0.522
tlr0193
ORF_ID:tlr0193; hypothetical protein.
 
     0.503
tlr2243
Protein serin-threonin phosphatase; ORF_ID:tlr2243.
  
 
   0.452
tlr1644
ORF_ID:tlr1644; probable protein phosphatase.
  
 
   0.441
tlr0191
ORF_ID:tlr0191; hypothetical protein.
       0.416
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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