STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr0421ORF_ID:tlr0421; similar to arsenical resistance protein ArsH. (182 aa)    
Predicted Functional Partners:
nrtC
Nitrate/nitrite transport system ATP-binding protein; ORF_ID:tlr1352.
  
  
 0.634
cmpC
Bicarbonate transport system ATP-binding protein; ORF_ID:tlr2002.
  
  
 0.634
tlr0420
ORF_ID:tlr0420; unknown protein.
       0.570
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.491
tlr1919
ORF_ID:tlr1919; hypothetical protein.
  
    0.474
tll0170
ORF_ID:tll0170; hypothetical protein.
  
   
 0.471
tlr0419
Fibrillin; ORF_ID:tlr0419.
       0.446
tll1924
Thioredoxin reductase; ORF_ID:tll1924.
  
  
 0.412
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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