Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fpg | polA | gene:10748168 | gene:10747937 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.987 |
| fpg | tll1924 | gene:10748168 | gene:10748531 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity). | Thioredoxin reductase; ORF_ID:tll1924. | 0.477 |
| fpg | tlr0898 | gene:10748168 | gene:10747490 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity). | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.974 |
| hemD | tll1924 | gene:10748766 | gene:10748531 | Porphyrin biosynthesis protein; ORF_ID:tlr2155. | Thioredoxin reductase; ORF_ID:tll1924. | 0.568 |
| hemD | tll1975 | gene:10748766 | gene:10748582 | Porphyrin biosynthesis protein; ORF_ID:tlr2155. | ORF_ID:tll1975; hypothetical protein. | 0.492 |
| hemD | tlr0898 | gene:10748766 | gene:10747490 | Porphyrin biosynthesis protein; ORF_ID:tlr2155. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.585 |
| pheT | polA | gene:10747252 | gene:10747937 | phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.734 |
| pheT | tll1924 | gene:10747252 | gene:10748531 | phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Thioredoxin reductase; ORF_ID:tll1924. | 0.640 |
| pheT | tlr0898 | gene:10747252 | gene:10747490 | phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.554 |
| pheT | tlr1165 | gene:10747252 | gene:10747760 | phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.474 |
| polA | fpg | gene:10747937 | gene:10748168 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity). | 0.987 |
| polA | pheT | gene:10747937 | gene:10747252 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.734 |
| polA | tll1924 | gene:10747937 | gene:10748531 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Thioredoxin reductase; ORF_ID:tll1924. | 0.530 |
| polA | tlr0898 | gene:10747937 | gene:10747490 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.740 |
| tll1729 | tlr0898 | gene:10748333 | gene:10747490 | ORF_ID:tll1729; similar to hetI protein; Belongs to the P-Pant transferase superfamily. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.903 |
| tll1924 | fpg | gene:10748531 | gene:10748168 | Thioredoxin reductase; ORF_ID:tll1924. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity). | 0.477 |
| tll1924 | hemD | gene:10748531 | gene:10748766 | Thioredoxin reductase; ORF_ID:tll1924. | Porphyrin biosynthesis protein; ORF_ID:tlr2155. | 0.568 |
| tll1924 | pheT | gene:10748531 | gene:10747252 | Thioredoxin reductase; ORF_ID:tll1924. | phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.640 |
| tll1924 | polA | gene:10748531 | gene:10747937 | Thioredoxin reductase; ORF_ID:tll1924. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.530 |
| tll1924 | tlr0898 | gene:10748531 | gene:10747490 | Thioredoxin reductase; ORF_ID:tll1924. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.626 |
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