STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll1033Polysaccharide deacetylase; ORF_ID:tll1033. (291 aa)    
Predicted Functional Partners:
tlr1854
ORF_ID:tlr1854; probable glycosyl transferase.
 
  
 0.945
cysH
Phosphoadenosine phosphosulfate reductase; ORF_ID:tll1035; Belongs to the PAPS reductase family. CysH subfamily.
 
    0.738
glyQ
glycyl-tRNA synthetase alpha chain; ORF_ID:tll1034.
       0.701
tlr1795
ORF_ID:tlr1795; similar to cellulose synthase.
 
  
 0.487
tll1329
ABC transporter ATP-binding protein; ORF_ID:tll1329.
     
 0.484
tll0007
Cellulose synthase; ORF_ID:tll0007.
  
  
 0.475
tll0064
ORF_ID:tll0064; probable glycosyltransferase.
  
  
 0.475
tll0986
ORF_ID:tll0986; hypothetical protein.
  
  
 0.475
tlr1346
ORF_ID:tlr1346; unknown protein.
  
  
 0.475
tlr1930
ORF_ID:tlr1930; probable glycosyl transferase.
  
  
 0.475
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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