STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr1067Amino acid ABC transporter periplasmic amino acid-binding protein; ORF_ID:tlr1067; Belongs to the bacterial solute-binding protein 3 family. (306 aa)    
Predicted Functional Partners:
tsr1069
Amino acid ABC transporter permease protein; ORF_ID:tsr1069.
 
 
 0.957
tlr1882
Amino acid ABC transporter ATP-binding protein; ORF_ID:tlr1882.
 
  
 0.805
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
       0.601
glsF
Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368.
  
  
 0.517
tll1282
Two-component hybrid sensor and regulator; ORF_ID:tll1282.
   
 
 0.503
tlr1612
ORF_ID:tlr1612; hypothetical protein.
     
 0.482
tll0627
ORF_ID:tll0627; hypothetical protein.
     
 0.480
putA
Proline oxidase; ORF_ID:tlr0416; Belongs to the aldehyde dehydrogenase family.
  
  
 0.479
tsr1068
Amino acid ABC transporter permease protein; ORF_ID:tsr1068.
       0.479
tlr0125
ORF_ID:tlr0125; unknown protein.
  
     0.457
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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