STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntcBNitrate assimilation transcriptional activator; LysR family protein; ORF_ID:tll1359; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
tll1358
ORF_ID:tll1358; probable glycosyl transferase.
     
 0.805
ntcA
Global nitrogen regulator; ORF_ID:tll1650.
   
  
 0.805
narB
Nitrate reductase; ORF_ID:tlr1355; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
      
 0.784
tll1357
ORF_ID:tll1357; hypothetical protein.
       0.773
nirA
Ferredoxin--nitrite reductase; ORF_ID:tlr1349; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.709
tll0761
Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
      
 0.626
glnA
Glutamate--ammonia ligase; ORF_ID:tll1588.
      
 0.583
glsF
Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368.
  
  
 0.570
tlr1170
ORF_ID:tlr1170; hypothetical protein.
  
   
 0.554
tsr2295
ORF_ID:tsr2295; hypothetical protein.
  
   
 0.541
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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