STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll1406Carboxyl-terminal processing protease; ORF_ID:tll1406; Belongs to the peptidase S41A family. (433 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase; ORF_ID:tll0662; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.561
tll1405
Cation efflux system protein; ORF_ID:tll1405; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.558
tll1642
Zinc metalloprotease; ORF_ID:tll1642; hypothetical protein.
  
  
 0.558
tll1407
ORF_ID:tll1407; unknown protein.
       0.505
tll1404
ORF_ID:tll1404; similar to geranylgeranyl bacteriochlorophyll reductase.
       0.443
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.429
moeB
Molybdopterin biosynthesis protein; ORF_ID:tlr2403.
  
    0.419
tll1409
ORF_ID:tll1409; hypothetical protein.
       0.410
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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