STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr1468ORF_ID:tlr1468; hypothetical protein. (118 aa)    
Predicted Functional Partners:
tsr1335
ORF_ID:tsr1335; hypothetical protein.
  
     0.775
tsr1701
ORF_ID:tsr1701; hypothetical protein.
  
     0.775
tll1852
ORF_ID:tll1852; hypothetical protein.
  
     0.775
tlr2126
ORF_ID:tlr2126; protein involved in constitutive low affinity CO2 uptake, CupB homolog.
  
     0.775
tll2367
ORF_ID:tll2367; hypothetical protein.
  
     0.775
tlr2451
ORF_ID:tlr2451; hypothetical protein.
  
     0.775
ccmN
Carbon dioxide concentrating mechanism protein; ORF_ID:tll0943.
  
     0.774
tlr1563
ORF_ID:tlr1563; hypothetical protein.
  
     0.774
tlr2015
ORF_ID:tlr2015; hypothetical protein.
  
     0.774
tlr2281
ORF_ID:tlr2281; hypothetical protein.
  
     0.774
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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