STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsl1516ORF_ID:tsl1516; hypothetical protein. (77 aa)    
Predicted Functional Partners:
tsl1609
ORF_ID:tsl1609; hypothetical protein.
  
     0.775
tsr1779
ORF_ID:tsr1779; hypothetical protein.
  
     0.775
tsl1837
ORF_ID:tsl1837; hypothetical protein.
  
     0.774
tsl1972
ORF_ID:tsl1972; hypothetical protein.
  
     0.772
ftrV
Ferredoxin-thioredoxin reductase variable chain; ORF_ID:tsl1517.
       0.762
ycf51
Ycf51 protein; ORF_ID:tll1092; hypothetical protein.
  
     0.761
tlr0940
ORF_ID:tlr0940; hypothetical protein.
  
     0.759
ccmN
Carbon dioxide concentrating mechanism protein; ORF_ID:tll0943.
  
     0.759
tsl0848
ORF_ID:tsl0848; hypothetical protein.
  
     0.755
tlr2130
ORF_ID:tlr2130; hypothetical protein.
  
     0.752
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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