STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll1841ABC transporter ATP-binding protein; ORF_ID:tll1841. (233 aa)    
Predicted Functional Partners:
tll1383
ABC transporter permease protein; ORF_ID:tll1383.
 
 0.979
tll1117
ORF_ID:tll1117; unknown protein.
 
 
 0.935
tlr0010
ABC transporter ATP-binding protein; ORF_ID:tlr0010.
 
   
0.923
cysW
Sulfate transport system permease protein; ORF_ID:tlr0276.
 
      0.890
tll1105
Peptide ABC transporter, permease protein; ORF_ID:tll1105.
 
 
    0.840
tll0644
devC-like ABC transporter permease protein; ORF_ID:tll0644.
 
 
 0.806
tll1842
ORF_ID:tll1842; putative arsenical pump-driving ATPase.
       0.727
tlr2006
Branched-chain amino acid ABC transporter ATP-binding protein; ORF_ID:tlr2006.
 
     
0.593
tlr0550
Branched-chain amino acid ABC transporter permease protein; ORF_ID:tlr0550; Belongs to the binding-protein-dependent transport system permease family.
 
 
    0.531
rpl14
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.515
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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