STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll2028ORF_ID:tll2028; hypothetical protein. (300 aa)    
Predicted Functional Partners:
tll2027
ORF_ID:tll2027; hypothetical protein.
 
     0.842
tlr2343
ORF_ID:tlr2343; hypothetical protein.
  
     0.772
tlr0754
ORF_ID:tlr0754; hypothetical protein.
  
     0.768
tlr0125
ORF_ID:tlr0125; unknown protein.
  
     0.760
tlr0066
ORF_ID:tlr0066; hypothetical protein.
  
     0.759
tlr2342
ORF_ID:tlr2342; hypothetical protein.
  
     0.746
tll0854
ORF_ID:tll0854; similar to allophycocyanin alpha subunit.
  
     0.727
tlr0805
ORF_ID:tlr0805; hypothetical protein.
  
     0.686
tll1831
Two-component sensor histidine kinase; ORF_ID:tll1831.
  
     0.686
tll0573
ORF_ID:tll0573; probable porin; major outer membrane protein; Belongs to the OprB family.
  
     0.681
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.