Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccmM | glsF | gene:10747536 | gene:10747966 | Carbon dioxide concentrating mechanism protein; ORF_ID:tll0944. | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | 0.505 |
| ccmM | tll1924 | gene:10747536 | gene:10748531 | Carbon dioxide concentrating mechanism protein; ORF_ID:tll0944. | Thioredoxin reductase; ORF_ID:tll1924. | 0.744 |
| ccmM | trxM2 | gene:10747536 | gene:10748697 | Carbon dioxide concentrating mechanism protein; ORF_ID:tll0944. | Thioredoxin M; ORF_ID:tll2087; Belongs to the thioredoxin family. | 0.733 |
| fus | glsF | gene:10748353 | gene:10747966 | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | 0.680 |
| fus | groEL-1 | gene:10748353 | gene:10746766 | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | 60kD chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.451 |
| fus | recA | gene:10748353 | gene:10748699 | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.442 |
| fus | tll1924 | gene:10748353 | gene:10748531 | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | Thioredoxin reductase; ORF_ID:tll1924. | 0.708 |
| fus | trxM2 | gene:10748353 | gene:10748697 | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | Thioredoxin M; ORF_ID:tll2087; Belongs to the thioredoxin family. | 0.550 |
| fus-2 | glsF | gene:10748979 | gene:10747966 | Elongation factor EF-G; ORF_ID:tll2359. | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | 0.680 |
| fus-2 | tll1924 | gene:10748979 | gene:10748531 | Elongation factor EF-G; ORF_ID:tll2359. | Thioredoxin reductase; ORF_ID:tll1924. | 0.708 |
| fus-2 | trxM2 | gene:10748979 | gene:10748697 | Elongation factor EF-G; ORF_ID:tll2359. | Thioredoxin M; ORF_ID:tll2087; Belongs to the thioredoxin family. | 0.550 |
| glsF | ccmM | gene:10747966 | gene:10747536 | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | Carbon dioxide concentrating mechanism protein; ORF_ID:tll0944. | 0.505 |
| glsF | fus | gene:10747966 | gene:10748353 | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | 0.680 |
| glsF | fus-2 | gene:10747966 | gene:10748979 | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | Elongation factor EF-G; ORF_ID:tll2359. | 0.680 |
| glsF | recA | gene:10747966 | gene:10748699 | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | Recombination protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.483 |
| glsF | tll1924 | gene:10747966 | gene:10748531 | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | Thioredoxin reductase; ORF_ID:tll1924. | 0.915 |
| glsF | trxM2 | gene:10747966 | gene:10748697 | Ferredoxin-dependent glutamate synthase; ORF_ID:tll1368. | Thioredoxin M; ORF_ID:tll2087; Belongs to the thioredoxin family. | 0.845 |
| groEL-1 | fus | gene:10746766 | gene:10748353 | 60kD chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Translation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] | 0.451 |
| groEL-1 | tll1924 | gene:10746766 | gene:10748531 | 60kD chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Thioredoxin reductase; ORF_ID:tll1924. | 0.653 |
| groEL-1 | trxM2 | gene:10746766 | gene:10748697 | 60kD chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Thioredoxin M; ORF_ID:tll2087; Belongs to the thioredoxin family. | 0.460 |
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