STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tll2227ORF_ID:tll2227; similar to type I restriction-modification system endonuclease. (132 aa)    
Predicted Functional Partners:
tll2233
ORF_ID:tll2233; similar to type I restriction-modification system DNA methylase.
 
 
 0.976
tll2230
Type I site-specific deoxyribonuclease endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
      0.943
tll2228
Type I site-specific deoxyribonuclease modification subunit; ORF_ID:tll2228.
  
 
 0.921
tll2229
Type I site-specific deoxyribonuclease specificity subunit; ORF_ID:tll2229.
  
  
 0.869
tsl2226
ORF_ID:tsl2226; unknown protein.
       0.773
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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