STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr2344ORF_ID:tlr2344; probable general secretion pathway protein D. (719 aa)    
Predicted Functional Partners:
pilM
PilM protein; ORF_ID:tlr2341; probable fimbrial assembly protein PilM.
 
  
 0.768
tlr2343
ORF_ID:tlr2343; hypothetical protein.
     
 0.758
tlr2342
ORF_ID:tlr2342; hypothetical protein.
     
 0.757
tlr0610
ORF_ID:tlr0610; hypothetical protein.
  
     0.755
pilC
PilC protein; ORF_ID:tll0119; similar to fimbrial assembly protein PilC.
 
  
 0.642
tll0627
ORF_ID:tll0627; hypothetical protein.
  
  
 0.621
tll0933
ORF_ID:tll0933; probable transglycosylase.
 
  
 0.613
tlr1323
ORF_ID:tlr1323; hypothetical protein.
  
     0.601
tll1008
ORF_ID:tll1008; hypothetical protein.
  
     0.592
tll1582
ORF_ID:tll1582; hypothetical protein.
  
     0.583
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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