STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf34Ycf34 protein; ORF_ID:tsl2457; hypothetical protein. (82 aa)    
Predicted Functional Partners:
tsr2138
ORF_ID:tsr2138; hypothetical protein.
  
     0.775
tll1867
ORF_ID:tll1867; hypothetical protein.
  
     0.770
tll2044
ORF_ID:tll2044; hypothetical protein.
  
     0.768
psbV
Cytochrome c550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. It is not essential for growth under normal conditions but is required under low CO(2) concentrations. PSII is a light-driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating a proton gradient subsequently used for ATP formation.
  
     0.763
tsl0017
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).
  
     0.754
tll1150
ORF_ID:tll1150; hypothetical protein.
  
     0.745
rpl32
50S ribosomal protein L32; ORF_ID:tsr1915; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.744
tll2172
ORF_ID:tll2172; hypothetical protein.
  
     0.742
tsr1432
ORF_ID:tsr1432; hypothetical protein.
  
     0.741
tlr1934
ORF_ID:tlr1934; hypothetical protein.
  
     0.731
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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