Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atp1 | atpI | gene:10747018 | gene:10747019 | H+-transporting ATP synthase chain; ORF_ID:tlr0429. | H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.669 |
| atp1 | tlr0428 | gene:10747018 | gene:10747017 | H+-transporting ATP synthase chain; ORF_ID:tlr0429. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.762 |
| atp1 | tsr0427 | gene:10747018 | gene:10747016 | H+-transporting ATP synthase chain; ORF_ID:tlr0429. | ORF_ID:tsr0427; similar to anti-sigma f factor antagonist. | 0.582 |
| atpI | atp1 | gene:10747019 | gene:10747018 | H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | H+-transporting ATP synthase chain; ORF_ID:tlr0429. | 0.669 |
| atpI | rpl3 | gene:10747019 | gene:10746659 | H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.733 |
| atpI | tlr0428 | gene:10747019 | gene:10747017 | H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.654 |
| atpI | tsr0427 | gene:10747019 | gene:10747016 | H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ORF_ID:tsr0427; similar to anti-sigma f factor antagonist. | 0.486 |
| cysS | tlr0428 | gene:10748432 | gene:10747017 | cysteinyl-tRNA synthetase; ORF_ID:tlr1827; Belongs to the class-I aminoacyl-tRNA synthetase family. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.889 |
| rpl27 | rpl3 | gene:10746746 | gene:10746659 | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
| rpl27 | rpl33 | gene:10746746 | gene:10748669 | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | 50S ribosomal protein L33; ORF_ID:tsr2060; Belongs to the bacterial ribosomal protein bL33 family. | 0.997 |
| rpl27 | tlr0428 | gene:10746746 | gene:10747017 | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.647 |
| rpl27 | tlr2161 | gene:10746746 | gene:10748772 | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | ORF_ID:tlr2161; hypothetical protein. | 0.629 |
| rpl27 | tlr2170 | gene:10746746 | gene:10748781 | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | Cyanophycin synthetase; ORF_ID:tlr2170. | 0.445 |
| rpl3 | atpI | gene:10746659 | gene:10747019 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | H+-transporting ATP synthase chain a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.733 |
| rpl3 | rpl27 | gene:10746659 | gene:10746746 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
| rpl3 | rpl33 | gene:10746659 | gene:10748669 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L33; ORF_ID:tsr2060; Belongs to the bacterial ribosomal protein bL33 family. | 0.996 |
| rpl3 | tlr0428 | gene:10746659 | gene:10747017 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.816 |
| rpl33 | rpl27 | gene:10748669 | gene:10746746 | 50S ribosomal protein L33; ORF_ID:tsr2060; Belongs to the bacterial ribosomal protein bL33 family. | 50S ribosomal protein L27; ORF_ID:tsl0166; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
| rpl33 | rpl3 | gene:10748669 | gene:10746659 | 50S ribosomal protein L33; ORF_ID:tsr2060; Belongs to the bacterial ribosomal protein bL33 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.996 |
| rpl33 | tlr0428 | gene:10748669 | gene:10747017 | 50S ribosomal protein L33; ORF_ID:tsr2060; Belongs to the bacterial ribosomal protein bL33 family. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.659 |
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