STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlr1933ORF_ID:tlr1933; hypothetical protein. (440 aa)    
Predicted Functional Partners:
tlr1930
ORF_ID:tlr1930; probable glycosyl transferase.
     0.985
tlr1854
ORF_ID:tlr1854; probable glycosyl transferase.
  
     0.679
tsr1932
ORF_ID:tsr1932; putative transposase.
       0.661
tlr2008
ORF_ID:tlr2008; hypothetical protein.
 
     0.597
tlr1934
ORF_ID:tlr1934; hypothetical protein.
       0.561
tlr1612
ORF_ID:tlr1612; hypothetical protein.
  
  
 0.556
tll0627
ORF_ID:tll0627; hypothetical protein.
  
  
 0.485
tll1033
Polysaccharide deacetylase; ORF_ID:tll1033.
  
  
 0.475
tlr1931
ORF_ID:tlr1931; putative transposase.
       0.475
tlr0924
ORF_ID:tlr0924; hypothetical protein.
 
    0.431
Your Current Organism:
Thermosynechococcus elongatus
NCBI taxonomy Id: 197221
Other names: T. elongatus BP-1, Thermosynechococcus elongatus BP-1, Thermosynechococcus elongatus IAM M-273, Thermosynechococcus elongatus NIES-2133, Thermosynechococcus elongatus str. BP-1, Thermosynechococcus elongatus strain BP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.