STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A51_18337Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (390 aa)    
Predicted Functional Partners:
B0A51_15278
Uncharacterized protein.
   
 0.999
B0A51_12723
Nucleoporin_C domain-containing protein.
   
 0.999
B0A51_08223
RanBD1 domain-containing protein.
   
 0.999
B0A51_01707
RanBD1 domain-containing protein.
   
 0.999
B0A51_02126
RanBD1 domain-containing protein.
   
 0.999
B0A51_10271
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.998
B0A51_17391
Uncharacterized protein.
    
 0.993
B0A51_15245
Nuclear pore protein.
   
 0.993
B0A51_08472
Uncharacterized protein.
   
 0.993
B0A51_07157
Uncharacterized protein.
   
 0.993
Your Current Organism:
Rachicladosporium sp. CCFEE5018
NCBI taxonomy Id: 1974281
Other names: R. sp. CCFEE 5018, Rachicladosporium sp. CCFEE 5018
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