STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A51_15401THUMP domain-containing protein. (636 aa)    
Predicted Functional Partners:
B0A51_04893
MJ1316 domain-containing protein.
     
 0.773
B0A51_00393
Uncharacterized protein.
     
 0.756
B0A51_14226
Aminotran_1_2 domain-containing protein.
   
 
 0.709
B0A51_06795
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.667
B0A51_07999
Uncharacterized protein.
     
 0.667
B0A51_06822
Uncharacterized protein.
     
 0.667
B0A51_01825
Ras-associating domain-containing protein.
     
 0.667
B0A51_18062
FAD-binding PCMH-type domain-containing protein.
     
 0.666
B0A51_03402
FAD-binding PCMH-type domain-containing protein.
     
 0.666
B0A51_10549
3Beta_HSD domain-containing protein.
     
 0.617
Your Current Organism:
Rachicladosporium sp. CCFEE5018
NCBI taxonomy Id: 1974281
Other names: R. sp. CCFEE 5018, Rachicladosporium sp. CCFEE 5018
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.