STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A51_11391RRM domain-containing protein. (314 aa)    
Predicted Functional Partners:
B0A51_08402
Uncharacterized protein.
   
 0.997
B0A51_06782
Uncharacterized protein.
   
 0.983
B0A51_04196
Uncharacterized protein.
   
 0.983
B0A51_05095
Uncharacterized protein.
   
 0.983
B0A51_00700
PHD finger-like domain-containing protein 5A.
    
 
 0.982
B0A51_11042
Uncharacterized protein.
   
 
 0.979
B0A51_01749
Pre-mRNA-splicing factor slt11.
    
 
 0.976
B0A51_08874
C2H2-type domain-containing protein.
   
   0.972
B0A51_16813
Uncharacterized protein.
  
 
 
 0.963
B0A51_15545
Uncharacterized protein.
  
 
 
 0.963
Your Current Organism:
Rachicladosporium sp. CCFEE5018
NCBI taxonomy Id: 1974281
Other names: R. sp. CCFEE 5018, Rachicladosporium sp. CCFEE 5018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.