STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A51_05538Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
B0A51_17446
BZIP domain-containing protein.
    
  0.683
B0A51_09772
Ubiquitin-40S ribosomal protein S27a.
    
  0.683
B0A51_13088
Uncharacterized protein.
    
  0.683
B0A51_14728
Uncharacterized protein.
   
 
  0.611
B0A51_12786
Replication factor C subunit 5.
   
 
  0.611
B0A51_18848
Uncharacterized protein.
    
 0.607
B0A51_18131
UmuC domain-containing protein.
    
 0.607
B0A51_16934
UmuC domain-containing protein.
    
 0.607
B0A51_03730
UmuC domain-containing protein.
    
 0.607
B0A51_03590
UmuC domain-containing protein.
    
 0.607
Your Current Organism:
Rachicladosporium sp. CCFEE5018
NCBI taxonomy Id: 1974281
Other names: R. sp. CCFEE 5018, Rachicladosporium sp. CCFEE 5018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.