STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKL45760.1Cyclohexadienyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (258 aa)    
Predicted Functional Partners:
OKL42431.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.843
OKL45657.1
Ectoine/hydroxyectoine ABC transporter permease subunit EhuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.836
OKL45658.1
Ectoine/hydroxyectoine ABC transporter permease subunit EhuD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.811
OKL42646.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.807
OKL44755.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.801
OKL43611.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.789
OKL44147.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.777
OKL45655.1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.768
OKL43610.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.763
OKL43130.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.760
Your Current Organism:
Nesiotobacter exalbescens
NCBI taxonomy Id: 197461
Other names: ATCC BAA-994, CIP 108449, DSM 16456, N. exalbescens, Nesiotobacter exalbescens Donachie et al. 2006, Nesiotobacter sp. WB1-6, alpha proteobacterium LA33B, strain LA33B
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