STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKL44755.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
OKL44754.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OKL44756.1
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OKL45655.1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
OKL43610.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
OKL43575.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 0.988
OKL43129.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 0.985
OKL42430.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.971
OKL42666.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.968
OKL42665.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 0.953
OKL43611.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.853
Your Current Organism:
Nesiotobacter exalbescens
NCBI taxonomy Id: 197461
Other names: ATCC BAA-994, CIP 108449, DSM 16456, N. exalbescens, Nesiotobacter exalbescens Donachie et al. 2006, Nesiotobacter sp. WB1-6, alpha proteobacterium LA33B, strain LA33B
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