STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002119345_00780Unannotated protein. (525 aa)    
Predicted Functional Partners:
GCA_002119345_02211
Unannotated protein.
 
 0.992
GCA_002119345_03049
Unannotated protein.
  
 
 0.989
GCA_002119345_00706
Unannotated protein.
  
 0.957
GCA_002119345_03048
Unannotated protein.
   
 
 0.947
GCA_002119345_03542
Unannotated protein.
   
 
 0.927
GCA_002119345_01796
Unannotated protein.
    
 0.923
GCA_002119345_00404
Unannotated protein.
     
 0.918
GCA_002119345_01198
Unannotated protein.
    
  0.904
GCA_002119345_02897
Unannotated protein.
     
 0.904
GCA_002119345_02945
Unannotated protein.
     
 0.904
Your Current Organism:
Halomonas sp. CSM2
NCBI taxonomy Id: 1975722
Other names: H. sp. CSM-2, Halomonas sp. CSM-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.