STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002119345_00832Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_002119345_00830
Unannotated protein.
 
  
 0.896
GCA_002119345_00829
Unannotated protein.
 
  
 0.878
GCA_002119345_00831
Unannotated protein.
       0.733
GCA_002119345_00167
Unannotated protein.
    
 
 0.635
GCA_002119345_00816
Unannotated protein.
    
 
 0.635
GCA_002119345_00615
Unannotated protein.
  
 0.581
GCA_002119345_02347
Unannotated protein.
    
 0.471
GCA_002119345_01876
Unannotated protein.
     
 0.462
GCA_002119345_02064
Unannotated protein.
     
 0.462
GCA_002119345_03392
Unannotated protein.
     
 0.462
Your Current Organism:
Halomonas sp. CSM2
NCBI taxonomy Id: 1975722
Other names: H. sp. CSM-2, Halomonas sp. CSM-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.