STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTG78310.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)    
Predicted Functional Partners:
OTG72043.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
OTG75525.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
OTG73308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
OTG78753.1
RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
OTG78880.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
OTG72443.1
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
OTG78615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
OTG78409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
OTG77851.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
OTG74406.1
Peptidase C13 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
Your Current Organism:
Acinetobacter sp. ANC4655
NCBI taxonomy Id: 1977878
Other names: A. sp. ANC 4655, Acinetobacter sp. ANC 4655
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