STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002088945_02519Unannotated protein. (160 aa)    
Predicted Functional Partners:
GCA_002088945_01339
Unannotated protein.
   
   0.855
GCA_002088945_01699
Unannotated protein.
   
   0.855
GCA_002088945_00919
Unannotated protein.
   
   0.850
GCA_002088945_01186
Unannotated protein.
   
   0.850
GCA_002088945_00925
Unannotated protein.
   
   0.848
GCA_002088945_02019
Unannotated protein.
   
   0.847
GCA_002088945_00285
Unannotated protein.
   
   0.846
GCA_002088945_00933
Unannotated protein.
  
   0.845
GCA_002088945_00944
Unannotated protein.
   
   0.845
GCA_002088945_02567
Unannotated protein.
    
 
 0.844
Your Current Organism:
Henriciella pelagia
NCBI taxonomy Id: 1977912
Other names: CGMCC 1.15928, H. pelagia, Henriciella pelagia Wu et al. 2017, Henriciella sp. LA220, KCTC 52577, strain LA220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.