STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002009425_03258Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_002009425_03879
Unannotated protein.
   
 
 0.769
GCA_002009425_01293
Unannotated protein.
   
 
  0.723
GCA_002009425_02800
Unannotated protein.
   
 
  0.685
GCA_002009425_03866
Unannotated protein.
   
 
  0.682
GCA_002009425_03259
Unannotated protein.
       0.661
GCA_002009425_02799
Unannotated protein.
   
 
  0.636
GCA_002009425_03875
Unannotated protein.
     
 0.631
GCA_002009425_03878
Unannotated protein.
     
 0.631
GCA_002009425_01028
Unannotated protein.
   
 
  0.607
GCA_002009425_01837
Unannotated protein.
  
  
  0.584
Your Current Organism:
Chromatiaceae bacterium 2141TSTBD0c01a
NCBI taxonomy Id: 1978339
Other names: C. bacterium 2141T.STBD.0c.01a, Chromatiaceae bacterium 2141T.STBD.0c.01a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.