STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105465_00852Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_002105465_00851
Unannotated protein.
 
 
 0.999
GCA_002105465_02723
Unannotated protein.
 
 
 
 0.854
GCA_002105465_00850
Unannotated protein.
  
    0.816
GCA_002105465_00849
Unannotated protein.
       0.729
GCA_002105465_02255
Unannotated protein.
 
  
 0.725
GCA_002105465_02334
Unannotated protein.
  
  
 0.641
GCA_002105465_03440
Unannotated protein.
 
  
 0.622
GCA_002105465_00875
Unannotated protein.
  
  
 0.615
GCA_002105465_00848
Unannotated protein.
       0.581
GCA_002105465_00511
Unannotated protein.
  
  
 0.572
Your Current Organism:
Aquidulcibacter paucihalophilus
NCBI taxonomy Id: 1978549
Other names: A. paucihalophilus, Aquidulcibacter paucihalophilus Cai et al. 2018, CGMCC 1.12979, Caulobacteraceae bacterium TH1-2, LMG 28362, LMG:28362, alpha proteobacterium 1-2, strain TH1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.