STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105465_02639Unannotated protein. (557 aa)    
Predicted Functional Partners:
GCA_002105465_02563
Unannotated protein.
  
  0.776
GCA_002105465_00708
Unannotated protein.
   
  0.720
GCA_002105465_01263
Unannotated protein.
   
  0.720
GCA_002105465_01694
Unannotated protein.
   
  0.720
GCA_002105465_00153
Unannotated protein.
  
  
  0.645
GCA_002105465_01010
Unannotated protein.
   
    0.588
GCA_002105465_02638
Unannotated protein.
       0.561
GCA_002105465_00271
Unannotated protein.
   
    0.558
GCA_002105465_02579
Unannotated protein.
   
    0.538
GCA_002105465_02640
Unannotated protein.
       0.538
Your Current Organism:
Aquidulcibacter paucihalophilus
NCBI taxonomy Id: 1978549
Other names: A. paucihalophilus, Aquidulcibacter paucihalophilus Cai et al. 2018, CGMCC 1.12979, Caulobacteraceae bacterium TH1-2, LMG 28362, LMG:28362, alpha proteobacterium 1-2, strain TH1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.