STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW80334.1Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)    
Predicted Functional Partners:
OQW80333.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OQW74750.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.975
OQW77083.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.965
OQW80610.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.960
OQW74504.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.960
OQW78941.1
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.930
OQW76361.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.916
OQW76328.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.872
glsA
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.
  
 
 0.842
OQW76343.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.841
Your Current Organism:
Proteobacteria bacterium STbin14
NCBI taxonomy Id: 1978762
Other names: P. bacterium ST_bin14, Proteobacteria bacterium ST_bin14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.