STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW63705.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
OQW63706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.853
OQW63708.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.851
OQW64415.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.838
BVN28_06410
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.799
OQW63707.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.766
OQW62385.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.765
OQW63232.1
Ni/Fe hydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.761
OQW64781.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.742
OQW63709.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.731
OQW66481.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.717
Your Current Organism:
Nitrospira sp. STbin4
NCBI taxonomy Id: 1978764
Other names: N. sp. ST-bin4, Nitrospira sp. ST-bin4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.