STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW65372.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)    
Predicted Functional Partners:
OQW65377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
OQW65376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
OQW65374.1
Type II secretion system protein GspN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.834
OQW65373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.819
OQW65370.1
Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.786
OQW65369.1
Type II secretion system protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.784
OQW66871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.760
OQW65375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.752
OQW65371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.743
OQW65501.1
Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.732
Your Current Organism:
Nitrospira sp. STbin5
NCBI taxonomy Id: 1978765
Other names: N. sp. ST-bin5, Nitrospira sp. ST-bin5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.