STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI67923.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (357 aa)    
Predicted Functional Partners:
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.999
SHI67878.1
Iron complex transport system substrate-binding protein.
 
 
 0.998
SHI58588.1
Iron complex transport system ATP-binding protein.
 
 0.996
SHI58398.1
Iron complex transport system substrate-binding protein.
 
 0.985
SHI71475.1
Iron complex transport system substrate-binding protein.
 
 0.985
SHJ52824.1
Iron complex transport system substrate-binding protein.
 
 0.983
SHI67841.1
Putative hemin transport protein.
 
  
 0.962
SHI67806.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
  
 0.896
SHI69018.1
Iron complex outermembrane recepter protein.
 
  
 0.583
SHJ39429.1
Enterobactin synthetase component F.
  
  
 0.539
Your Current Organism:
Roseomonas rosea
NCBI taxonomy Id: 198092
Other names: CIP 107419, DSM 14916, Muricoccus roseus, Muricoccus roseus Kampfer et al. 2003, R. rosea, Roseomonas rosea (Kampfer et al. 2003) Sanchez-Porro et al. 2009, strain 173-96, strain 173/96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.