Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI34025.1 | SHI71436.1 | SAMN02745194_00071 | SAMN02745194_00912 | Salicylate hydroxylase. | Lysophospholipase L1. | 0.580 |
SHI34025.1 | SHK51210.1 | SAMN02745194_00071 | SAMN02745194_05067 | Salicylate hydroxylase. | Superfamily II DNA or RNA helicase. | 0.414 |
SHI71436.1 | SHI34025.1 | SAMN02745194_00912 | SAMN02745194_00071 | Lysophospholipase L1. | Salicylate hydroxylase. | 0.580 |
SHI71436.1 | SHI71475.1 | SAMN02745194_00912 | SAMN02745194_00913 | Lysophospholipase L1. | Iron complex transport system substrate-binding protein. | 0.541 |
SHI71436.1 | SHI71501.1 | SAMN02745194_00912 | SAMN02745194_00914 | Lysophospholipase L1. | Iron complex outermembrane recepter protein. | 0.541 |
SHI71436.1 | SHI97034.1 | SAMN02745194_00912 | SAMN02745194_01447 | Lysophospholipase L1. | Hypothetical protein. | 0.711 |
SHI71436.1 | SHJ14501.1 | SAMN02745194_00912 | SAMN02745194_01840 | Lysophospholipase L1. | Endo-1,4-beta-xylanase. | 0.676 |
SHI71436.1 | SHJ71101.1 | SAMN02745194_00912 | SAMN02745194_03194 | Lysophospholipase L1. | Endo-1,4-beta-xylanase. | 0.609 |
SHI71436.1 | SHJ72762.1 | SAMN02745194_00912 | SAMN02745194_03205 | Lysophospholipase L1. | Hypothetical protein. | 0.601 |
SHI71436.1 | SHK09879.1 | SAMN02745194_00912 | SAMN02745194_04175 | Lysophospholipase L1. | Hypothetical protein. | 0.653 |
SHI71436.1 | SHK39362.1 | SAMN02745194_00912 | SAMN02745194_04827 | Lysophospholipase L1. | Ca2+-binding protein, RTX toxin-related. | 0.711 |
SHI71436.1 | SHK51210.1 | SAMN02745194_00912 | SAMN02745194_05067 | Lysophospholipase L1. | Superfamily II DNA or RNA helicase. | 0.592 |
SHI71475.1 | SHI71436.1 | SAMN02745194_00913 | SAMN02745194_00912 | Iron complex transport system substrate-binding protein. | Lysophospholipase L1. | 0.541 |
SHI71475.1 | SHI71501.1 | SAMN02745194_00913 | SAMN02745194_00914 | Iron complex transport system substrate-binding protein. | Iron complex outermembrane recepter protein. | 0.830 |
SHI71501.1 | SHI71436.1 | SAMN02745194_00914 | SAMN02745194_00912 | Iron complex outermembrane recepter protein. | Lysophospholipase L1. | 0.541 |
SHI71501.1 | SHI71475.1 | SAMN02745194_00914 | SAMN02745194_00913 | Iron complex outermembrane recepter protein. | Iron complex transport system substrate-binding protein. | 0.830 |
SHI97034.1 | SHI71436.1 | SAMN02745194_01447 | SAMN02745194_00912 | Hypothetical protein. | Lysophospholipase L1. | 0.711 |
SHI97034.1 | SHJ72762.1 | SAMN02745194_01447 | SAMN02745194_03205 | Hypothetical protein. | Hypothetical protein. | 0.700 |
SHI97034.1 | SHK09879.1 | SAMN02745194_01447 | SAMN02745194_04175 | Hypothetical protein. | Hypothetical protein. | 0.509 |
SHJ14501.1 | SHI71436.1 | SAMN02745194_01840 | SAMN02745194_00912 | Endo-1,4-beta-xylanase. | Lysophospholipase L1. | 0.676 |
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