Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI88503.1 | SHJ21547.1 | SAMN02745194_01265 | SAMN02745194_02004 | 2-dehydro-3-deoxygluconokinase. | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.520 |
SHI88503.1 | uxuA | SAMN02745194_01265 | SAMN02745194_01263 | 2-dehydro-3-deoxygluconokinase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.985 |
SHJ21547.1 | SHI88503.1 | SAMN02745194_02004 | SAMN02745194_01265 | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydro-3-deoxygluconokinase. | 0.520 |
SHJ21547.1 | SHJ54164.1 | SAMN02745194_02004 | SAMN02745194_02825 | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydropantoate 2-reductase. | 0.542 |
SHJ21547.1 | uxuA | SAMN02745194_02004 | SAMN02745194_01263 | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.540 |
SHJ54164.1 | SHJ21547.1 | SAMN02745194_02825 | SAMN02745194_02004 | 2-dehydropantoate 2-reductase. | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.542 |
uxuA | SHI88503.1 | SAMN02745194_01263 | SAMN02745194_01265 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 2-dehydro-3-deoxygluconokinase. | 0.985 |
uxuA | SHJ21547.1 | SAMN02745194_01263 | SAMN02745194_02004 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.540 |