STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ29761.1Carbon-monoxide dehydrogenase large subunit. (779 aa)    
Predicted Functional Partners:
SHJ29825.1
Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family.
 0.993
SHJ94694.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 0.989
SHJ45735.1
Carbon-monoxide dehydrogenase small subunit.
 0.988
SHJ29793.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.985
SHI60044.1
Nicotinate dehydrogenase subunit A.
 0.971
SHI87501.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 0.956
SHJ45768.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.943
SHI33487.1
Nicotinate dehydrogenase subunit A.
 0.908
SHJ94667.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 0.870
SHJ29732.1
Dihydroorotase.
 
     0.866
Your Current Organism:
Roseomonas rosea
NCBI taxonomy Id: 198092
Other names: CIP 107419, DSM 14916, Muricoccus roseus, Muricoccus roseus Kampfer et al. 2003, R. rosea, Roseomonas rosea (Kampfer et al. 2003) Sanchez-Porro et al. 2009, strain 173-96, strain 173/96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.